提问人:Maryam 提问时间:10/19/2023 更新时间:10/19/2023 访问量:48
将 Spatial 10x 数据上传到 seurat
Uploading Spatial 10x data into seurat
问:
我正在尝试将我的 10X Visium 数据上传到 are,以便我可以创建一个 Seurat 对象,但由于某种原因,数据无法上传。我正在使用 Satija 实验室的代码来加载数据
Load10X_Spatial(
data.dir,
filename = "filtered_feature_bc_matrix.h5", #here I have the h5 file for the filtered but I was wondering how would I also get the images to be uploaded as well because the output from the spaceranger has a folder called "Spatial" but I was not sure.
assay = "Spatial",
slice = "slice1",
filter.matrix = TRUE,
to.upper = FALSE,
image = NULL,
...
)
答: 暂无答案
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