提问人:Ignacio 提问时间:9/30/2014 最后编辑:HenrikIgnacio 更新时间:11/7/2020 访问量:11338
当我在“dplyr”之后加载“plyr”时,为什么summarize或mutate不适用于group_by?
Why does summarize or mutate not work with group_by when I load `plyr` after `dplyr`?
问:
注意:这个问题的标题已经过编辑,使其成为函数掩盖其对应项时问题的规范问题。问题的其余部分保持不变。plyr
dplyr
假设我有以下数据:
dfx <- data.frame(
group = c(rep('A', 8), rep('B', 15), rep('C', 6)),
sex = sample(c("M", "F"), size = 29, replace = TRUE),
age = runif(n = 29, min = 18, max = 54)
)
使用旧的,我可以使用以下代码创建一个小表来汇总我的数据:plyr
require(plyr)
ddply(dfx, .(group, sex), summarize,
mean = round(mean(age), 2),
sd = round(sd(age), 2))
输出如下所示:
group sex mean sd
1 A F 49.68 5.68
2 A M 32.21 6.27
3 B F 31.87 9.80
4 B M 37.54 9.73
5 C F 40.61 15.21
6 C M 36.33 11.33
我正在尝试将我的代码移动到运算符。我的代码采用 DF,然后按组和性别对其进行分组,然后对其进行总结。那是:dplyr
%>%
dfx %>% group_by(group, sex) %>%
summarise(mean = round(mean(age), 2), sd = round(sd(age), 2))
但我的输出是:
mean sd
1 35.56 9.92
我做错了什么?
答:
25赞
Carlos Cinelli
9/30/2014
#1
这里的问题是你先加载 dplyr 然后加载 plyr,所以 plyr 的函数屏蔽了 dplyr 的函数。发生这种情况时,您会收到以下警告:summarise
summarise
library(plyr)
Loading required package: plyr
------------------------------------------------------------------------------------------
You have loaded plyr after dplyr - this is likely to cause problems.
If you need functions from both plyr and dplyr, please load plyr first, then dplyr:
library(plyr); library(dplyr)
------------------------------------------------------------------------------------------
Attaching package: ‘plyr’
The following objects are masked from ‘package:dplyr’:
arrange, desc, failwith, id, mutate, summarise, summarize
因此,为了使您的代码正常工作,请分离 plyr 或重新启动 R 并首先加载 plyr,然后加载 dplyr(或仅加载 dplyr):detach(package:plyr)
library(dplyr)
dfx %>% group_by(group, sex) %>%
summarise(mean = round(mean(age), 2), sd = round(sd(age), 2))
Source: local data frame [6 x 4]
Groups: group
group sex mean sd
1 A F 41.51 8.24
2 A M 32.23 11.85
3 B F 38.79 11.93
4 B M 31.00 7.92
5 C F 24.97 7.46
6 C M 36.17 9.11
或者你可以在代码中显式调用 dplyr 的 summarise,这样无论你如何加载包,都会调用正确的函数:
dfx %>% group_by(group, sex) %>%
dplyr::summarise(mean = round(mean(age), 2), sd = round(sd(age), 2))
评论
13赞
hadley
9/30/2014
我不明白为什么很少有人注意到这个警告:/
2赞
Gregor Thomas
3/4/2016
@hadleyfortunes::fortune(9)
4赞
A5C1D2H2I1M1N2O1R2T1
9/30/2014
#2
您的代码正在调用,而不是由于您加载“plyr”和“dplyr”的顺序。plyr::summarise
dplyr::summarise
演示:
library(dplyr) ## I'm guessing this is the order you loaded
library(plyr)
dfx %>% group_by(group, sex) %>%
summarise(mean = round(mean(age), 2), sd = round(sd(age), 2))
# mean sd
# 1 36.88 9.76
dfx %>% group_by(group, sex) %>%
dplyr::summarise(mean = round(mean(age), 2), sd = round(sd(age), 2))
# Source: local data frame [6 x 4]
# Groups: group
#
# group sex mean sd
# 1 A F 32.17 6.30
# 2 A M 30.98 7.37
# 3 B F 38.20 7.67
# 4 B M 33.12 12.24
# 5 C F 43.91 10.31
# 6 C M 47.53 8.25
评论